When comparing Coggle vs Joplin, the Slant community recommends Joplin for most people. In the question“What is the best cross-platform note-taking app?” Joplin is ranked 2nd while Coggle is ranked 56th.
Specs
Ranked in these QuestionsQuestion Ranking
Pros
Pro Supports Markdown (their own variant)
Markdown is a plain text formatting syntax designed so that it can optionally be converted to HTML using a tool by the same name.
Pro Collaborative
Coggle allows inviting friends and colleagues to work collaboratively on notes and diagrams in real-time.
Pro Pretty diagrams
No effort to create beautiful diagrams.
Pro Supports LaTeX
LaTeX is a document preparation system and document markup language. It is the de facto standard for the communication and publication of scientific documents.
Pro Allows easy color-coding of paths
Pro Versioning support
Enter history mode to view all changes to a diagram over time, and make a copy from that point.
Pro Optional Chrome store App
Pro Free
Pro Lots of export options
Exports to PDF, image, plaintext and .mm files.
Pro Offline access
Pro Open source
Peace of mind that there is no malicious piece of software in the app.
Pro Encryption
Pro Cross-platform
Supports Windows, Mac, Linux, Android and iOS.
Pro Supports file attachments
Pro Supports markdown
Pro Supports tags for notes
Pro Web Clipper
Browser extension saves full pages, clean content, or screen selections to new notes.
Pro Optional CLI interface
Provides a CLI interface for terminal lovers.

Pro Supports multiple languages
English, French, and Spanish, Italian, German, Czech and many others.
Pro Active user forum with support from app creators
Support, troubleshooting, and new feature requests are easy to make at the user forum and you can contact the app creator directly.
Pro Dropbox support
Can sync using Dropbox.
Pro Nextcloud support
Pro Timed alarm reminder for to-do lists
Cons
Con Tree relations only; no non-parent links
Coggle's model allows a node to have multiple children, but only one parent, and no other connections of any sort.
Con Unconventional note taking style
Coggle is a mind mapping application, not a traditional text based note storage platform.
Con Sync issues with Android
If update on Linux then sync on Android, sometimes the Android sync will duplicate or remove some journal notes. Seems to be a bug in the Android app. The Linux app alone without sync with Android seems to work well using Dropbox. But don't expect changes you make on Android to sync properly back to Linux.
Con Sync issue under Linux
The Linux client has a bug that requires the user to click the mouse frequently in order for sync to proceed. This bug has been open for a while.
Con Gargantuan memory footprint
1GB+ of memory for taking notes.
Con Old school interface
Con Bloated
This project is suffering from feature creep and uses a lot of memory for a note-taking app.
Con App Image launches very slowly
On Linux, you can only install via App Image, which take 5+ seconds to launch. I can launch LibreOffice in under two seconds.
Con Sync issues on Windows
No way to change account settings and sync easily corrupted.
Con Weak tag searching
Joplin can currently only search for a single tag at a time. None of the boolean operators (AND, OR, NOT) are available for use in searches. This greatly diminishes the usefulness of tags in Joplin.
Con Can't create tags from the mobile app
