When comparing StackEdit vs Workflowy, the Slant community recommends Workflowy for most people. In the question“What is the best cross-platform note-taking app?” Workflowy is ranked 14th while StackEdit is ranked 27th. The most important reason people chose Workflowy is:
Any sublist can be viewed as a top-level list. This sounds simple but makes WorkFlowy extremely powerful. For example, the same line item, "write my book," can simultaneously be a to-do in a task list and the container for an entire working document.
Specs
Ranked in these QuestionsQuestion Ranking
Pros
Pro Works online and offline
StackEdit works within your browser. You need internet access to connect to the website, but once it's loaded, the site does not require an internet connection - you will be able to edit and save files locally. Additionally, you can use Fluid to turn it into a native desktop application.
Pro Supports various Markdown flavors
Supports standard Markdown and Markdown Extra.

Pro Simple workflow
It is very easy to toggle between the preview and the editing windows. The black makes it a very focused writing environment. Of course it's possible to change that if needed.

Pro Great when in full-screen
Pro No need to install additional software
StackEdit works directly from the browser, there's no need to install additional software as long as you have a web browser installed on your computer.
Pro Real-time preview
The preview shows in a collapsible pane on the right hand side.
Pro Instant publishing
StackEdit allows pushing a document directly to a list of publishing or file storage platforms or any SSH server.
Pro Multiple export options
Can export to .txt, .html and .pdf.
Pro Syncs via Dropbox and Drive
Files can be synchronized through Dropbox and Drive.
Pro Outline-style hierarchy with zoom
Any sublist can be viewed as a top-level list. This sounds simple but makes WorkFlowy extremely powerful. For example, the same line item, "write my book," can simultaneously be a to-do in a task list and the container for an entire working document.
Pro Minimalistic interface
Interface has no clutter. It allows focusing on thoughts to note down. This keeps things simple and easy to understand, which can help keep everything organized in an intuitive manner.
Pro Easy to see an overview and organize notes
All notes are part of a list, which makes it easy to organize everything. Nested lists allow for organizing notes into hierarchical categories of infinite depth. All lists can be folded. WorkFlowy also has tags and instant full-text search.
Pro Super fast sync between devices
While adding a list of to-do on web, it syncs with iPhone and iPad apps very quickly. This way you can jump between devices with no delay of up to date content.
Pro Quickly focus on a specific topic
Enables users to focus on specific topic area, which is referred to as "hoisting" within Workflowy.
Pro Supports tags
Enables users to search by tags.
Pro Cross-platform web and mobile
WorkFlowy can be accessed from either a browser or their apps, which include a Chrome app for desktops as well as an iOS and Android app. This makes it easy to access ones notes no matter the platform or device being used.
Pro Deep nesting
Workflowy's 'everything is in a tree' interface makes it easy to keep expanding on topics, no matter where, or how deep in the hierarchy they are.

Pro Tasks can be added and manipulated quickly
WorkFlowy allows entering many tasks very quickly – especially useful for meeting minutes or a "brain dump" when you have to type fast. After typing in all your thoughts, it's very easy to organize and sort multiple groups at once.
Pro Import and export via OPML
OPML (Outline Processor Markup Language) is a commonly used standard for text exchange. With two-way support for OPML you are never locked into Workflowy. Importing/exporting via copy/paste of entire outlines is a snap.
Pro Text formatting
You can have bold, italic, and underlined text.
Pro Strong community
There are number of talented coders who help customize WorkFlowy with extensions and styles. It has an active blog and welcomes collaboration.
Pro Daily digest email
WorkFlowy can send you an email with that day's activity. It's a great way to track progress.
Cons
Con Saves files in browser's local storage
Local storage is limited and if the browser crashes the text can be lost.
Con Cannot be accessed while being offline
Even though the editor itself works offline, you need internet access to open the website and the editor.
Con Lacks a good integrated spell checker
Uses the built-in browser spell checker which may not be as good as spell checkers other editors have. Depending on the browser, of course.
Con Publishing to GitHub requires giving write access to repos
In order to publish documents to GitHub, StackEdit requires writing access to your repos, something which many people may not be comfortable with.
Con Doesn't work well in mobile browsers
The functionality of the mobile version of the site is a bit limited, while new features have been added such as the ability to move lines of text, even that is limited on Android to only being functional on Chrome.
Con Offline desktop app requires Chrome
The offline desktop requires installing Google Chrome first before the WorkFlowy app can be installed. This is not good news for non-Chrome users especially users who frequently uses Firefox or Safari as their default browsers, in which Chrome app also suffers memory leak and battery issues.
Con Inconvenient interface
Notes automatically collapse, making them unreadable without user interaction. You cannot view multiple long notes at once.
Con No public API
Con Cannot use link-text
You cannot have text link to a URL. When you link to a website you have to post the full URL instead. Instead of having the name of the website or article like, Slant, you instead have to post http://slant.co
. It's especially annoying if you have a long URL that takes up a lot of space in the document.
Con No support for Right-To-Left languages
Mixed text is scrambled, and text-alignment is wrong.
Con Doesn't work on all mobile phones
Not compatible with Android OS version 4.1 and 4.2.
Con Infrequent updates and new features
WorkFlowy works well but it is hardly ever updated, in comparison to Dynalist, which works in a very similar way but has more features and is updated weekly.
Con Only supports one big text file
Although with Workflowy's focus feature this can work, you might prefer managing separate text files.
