When comparing Omnifocus vs Joplin, the Slant community recommends Joplin for most people. In the question“What are the best cross-platform task apps?” Joplin is ranked 5th while Omnifocus is ranked 63rd.
Specs
Ranked in these QuestionsQuestion Ranking
Pros
Pro Defer date
Omnifocus allows users to setup the "defer date" which can be treated as "start date". Tasks will not be marked as available until that date, which should help to focus on the "available" task only.
Pro Forecast summary
The forecast summary shows a quick digest of the tasks you have for the day. You can select any day to quickly see what tasks you have planned that day. For extra functionality you can connect with the iPhone’s Calender app, which allows you to also see any other events you have planned that day.
Pro See an overview of all tasks via "Perspective"
The Perspective section allows you to see an overview of the tasks you have set. It also allows you to set contexts or see things you have flagged.
Pro Nearby and context-sensitive tasks
OmniFocus 2 allows you to set up contexts for tasks in certain areas. This makes sure you never miss a task when you're out running errands and happen to be near something you need to do.
Pro Offline access
Pro Open source
Peace of mind that there is no malicious piece of software in the app.
Pro Encryption
Pro Cross-platform
Supports Windows, Mac, Linux, Android and iOS.
Pro Supports file attachments
Pro Supports markdown
Pro Supports tags for notes
Pro Web Clipper
Browser extension saves full pages, clean content, or screen selections to new notes.
Pro Optional CLI interface
Provides a CLI interface for terminal lovers.
Pro Supports multiple languages
English, French, and Spanish, Italian, German, Czech and many others.
Pro Active user forum with support from app creators
Support, troubleshooting, and new feature requests are easy to make at the user forum and you can contact the app creator directly.
Pro Dropbox support
Can sync using Dropbox.
Pro Nextcloud support
Pro Timed alarm reminder for to-do lists
Cons
Con Mac and iOS only
Omnifocus doesn’t work on non-Apple platforms.
Con Sync issues with Android
If update on Linux then sync on Android, sometimes the Android sync will duplicate or remove some journal notes. Seems to be a bug in the Android app. The Linux app alone without sync with Android seems to work well using Dropbox. But don't expect changes you make on Android to sync properly back to Linux.
Con Sync issue under Linux
The Linux client has a bug that requires the user to click the mouse frequently in order for sync to proceed. This bug has been open for a while.
Con Gargantuan memory footprint
1GB+ of memory for taking notes.
Con Old school interface
Con Bloated
This project is suffering from feature creep and uses a lot of memory for a note-taking app.
Con App Image launches very slowly
On Linux, you can only install via App Image, which take 5+ seconds to launch. I can launch LibreOffice in under two seconds.
Con Sync issues on Windows
No way to change account settings and sync easily corrupted.
Con Weak tag searching
Joplin can currently only search for a single tag at a time. None of the boolean operators (AND, OR, NOT) are available for use in searches. This greatly diminishes the usefulness of tags in Joplin.