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PassionateNuha's Experience
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Zotero integrates with my academic workflow linking notes with citations and providing links, backlinks, tags, and collections. I previously used EndNote for academic note-taking but it is expensive and not open-source. Although other note-taking software may provide some features like free-form hierarchical organization (Zotero is alphanumeric) and easy export to .txt or .md (Zotero exports to html), the integration of powerful note-taking capabilities in this open-source bibliographic database app makes it preferable to standalone note-taking apps like Simplenote, Cherrytree, Zkn3, or nvAlt. Zotero also performs very well on all main platforms. See More
Evernote is designed to make it easy to keep your notes well organized, which aids in quickly finding/browsing old information. You can put notes into a single notebook and use search to access old notes, or if you're so inclined, organize notes extensively with hierarchical notebooks and tags. See More