Here’s the Deal
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When comparing BusyBox vs Cygwin, the Slant community recommends Cygwin for most people. In the question“What are the best collections of Unix libraries for Windows?” Cygwin is ranked 2nd while BusyBox is ranked 9th.
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Common Questions
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Pros
No pros yet!
Pro Additional packages available via Cygwin Ports project
Pro Better default terminal
Cygwin's default terminal "Mintty" is far better than CMD.
Pro You can run graphical applications
It has X Server.
Cons
No cons yet!
Con Many incompatibilities
A lot of tools don't actually work with Cygwin, and documentation is often sparse, so for many use cases, it's worth the small bit of extra effort to just run a full virtual machine.